Researchers studying phylogenetic relationships need software that is able to visualize rooted phylogenetic trees and networks efficiently, increasingly of large datasets involving hundreds of thousands of taxa. The program should be user friendly (easy to run on all popular operating systems), facilitate interactive browsing and editing the trees and allow one to export the result in multiple file formats in publication quality. In addition, there is a need for a program that allows one to compute rooted phylogenetic networks from trees. ...
TreeView X is an open source program to display phylogenetic trees on Linux, Unix, Mac OS X, and Windows platforms. It can read and display NEXUS and Newick format tree files (such as those output by PAUP*, Clustal X , TREE-PUZZLE, and other programs). It has a subset of......
FigTree is designed as a graphical viewer of phylogenetic trees and as a program for producing publication-ready figures. As with most of my programs, it was written for my own needs so may not be as polished and feature-complete as a commercial program. In particular it is designed to display......
Tree drawing software for Apple Macintosh and Windows.......
Archaeopteryx is a software tool for the visualization, analysis, and editing of potentially large and highly annotated phylogenetic trees. Archaeopteryx (the successor to ATV) is entirely written in the Java programming language (it is based on the forester libraries).......
RightNote will help you get a grip on information overload. It is designed to be easy to use for the new-comer, but also provide advanced features once your notes start to accumulate. RightNote can store text notes, source code, spreadsheets and webpages. Find info as you type with highlighted search......
Natural Creative Power that's Easy To UseNatural Graphics is the developer of Natural Scene Designer -- a powerful yet easy to use 3D program which lets you design, render, and animate natural outdoor scenes. Its intuitive interface makes it easy to use for beginners, while advanced users will appreciate its......
Gijgo is a set of free open source javascript widgets distributed under MIT License. All widgets are high performance and compatible with jQuery, jQuery UI, Bootstrap and Foundation.......
Write and organize your ideas in Gingko tree documents.Whether building a business or writing a bestseller,Gingko lets your ideas flow naturally into place.Write, brainstorm, and organize your document, all in the same flow.You can also work with others, with Real-time collaboration.......
Understand the world better every day with simple, bite-sized and scientific explanations. Your customized feed enables you to leverage down times and read factual, unbiased content by experts without interrupting your day. Discover new topics and easily understand fundamental scientific concepts in Biology, Chemistry and Physics.......
Tulip is an information visualization framework dedicated to the analysis and visualization of relational data. Tulip aims to provide the developer with a complete library, supporting the design of interactive information visualization applications for relational data that can be tailored to the problems he or she is addressing. Written......
Carrier Frequency Calculator using Hardy-Weinberg equationThe calculator below uses the Hardy-Weinberg equation: p²+ 2pq+ q² = 1to estimate the frequency of the carrier state (2pq) for an autosomal recessive trait .......
WinRHIZO is an image analysis system specifically designed for root measurement in different forms. It can do morphology (length, area, volume...), topology, architecture and color analyses. It is made of a computer program and image acquisition components that can be combined to meet different needs and budgets.WinRHIZO automatically or interactively......
Calculate frequencies according to hardy Weinberg lawApplet runs on Java-enabled browsersPC: Internet Explorer 5.5 or higher and Netscape 4.08 or higherMac: Internet Explorer 5.0, IE5.1.4 or higher (IE5.1 will not work because of a bug.)......
the prefuse visualization toolkitPrefuse is a set of software tools for creating rich interactive data visualizations. The original prefuse toolkit provides a visualization framework for the Java programming language. The prefuse flare toolkit provides visualization and animation tools for ActionScript and the Adobe Flash Player.NOTE: Prefuse development has been opened......
TreePie : a simple way to display disk usage. It shows the distribution of size in a tree of directories by using an interactive multilevel pie (sunburst diagram). Really small and simple.......
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