AtomEye is atomistic visualization software fast enough to handle output of molecular dynamics simulations with millions of atoms. It includes parallel and perspective projections with full three-dimensional navigation, customizable bond and coordination number calculation, colour-encoding of arbitrary user-defined quantities, local atomic strain invariant, coloured atom tiling and tracing, up to 16 cutting planes, periodic boundary condition translations, JPEG, PNG, and EPS screenshots, and animation scripting. ...
Graphical program for the display, manipulation, and analysis of isolated molecules and periodic structures.......
BioBlender is a software package built on the open-source 3D modeling software Blender .Biology works at nanoscale, with objects invisible to the human eye. With BioBlender it is possible to show some of the characters that populate our cells, based on scientific data and the highest standard of 3D......
We are creating a visual interface to the world's scientific knowledge that can be used by anyone in order to dramatically improve the discoverability of research resultsWe are going to provide a large-scale system of open, interactive and interlinked knowledge maps spanning all fields of research.We will develop a space......
Jmol is a free, open source molecule viewer for students, educators, and researchers in chemistry and biochemistry. It is cross-platform, running on Windows, Mac OS X, and Linux/Unix systems.The JmolApplet is a web browser applet that can be integrated into web pages.The Jmol application is a standalone Java application that......
VisTrails is an open-source scientific workflow and provenance management system that supports data exploration and visualization.VisTrails provides a general infrastructure that can be combined with existing systems and libraries. Official releases come with several packages, including VTK, matplotlib, and ImageMagick. The system is written in Python/Qt and runs on Mac,......
Aveloy Graph is an application for graph creation / data visualization - fast, easy to use and interactive.......
3D model of the Solar System and night sky in real time (running on Adobe Air)......
Gravit is a free, visually stunning gravity simulator, where you can spend endless time experimenting with various configurations of simulated universes.......
4Peaks - For Peaks, Four Peaks. The award winning 4Peaks helps molecular biologists to visualize and edit their DNA sequence trace files. Analyzing your sequence has never been so much fun!......
Math Doubts is a scientific mathematics learning places, targets students, teachers and mathematicians. It was originally founded in 2010. It educates the math concepts from basic fundamentals to advanced scientific level for those who want to learn mathematics and applied mathematics online.......
CompPad is an OpenOffice extension to provide live mathematical and engineering calculations within a Writer document, allowing calculations to be documented using all of the resources of OpenOffice. It will have functionality similar to Mathcad, but is not intended to be a Mathcad clone. Rather, I hope it might prove......
Scientific software for the molecular biologist. Performs virtual DNA cloning, analyses DNA for restriction enzymes, homing enzymes and primer sites, dam and dcm methylation sites, finds and translates open reading frames. Calculates annealing temperatures for PCR. Generates DNA/plasmid plots, virtual agarose gel plots, XY-homology plots - and more!......
Lucid tools are powerful and highly flexible knowledge management software applications designed to help users with identification or diagnostic tasks.Lucid software is a special type of expert system, specifically designed for identification and diagnostic purposes, which enables expert knowledge to be “cloned” and distributed to a wide audience via CD......
Gwyddion is a modular program for SPM (scanning probe microscopy) data visualization and analysis. Primarily it is intended for analysis of height fields obtained by scanning probe microscopy techniques (AFM, MFM, STM, SNOM/NSOM), however it can be generally used for any other height field and image analysis, for instance for......
Drishti is an open-source scientific visualisation software designed by Ajay Limaye at the National Computational Infrastructure's VizLab.The central idea of Drishti is that scientists can use it to explore and present volumetric datasets without extensive training.Drishti has been developed with its end use in mind: ie. visualising volumetric data, such......
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