DNA Baser Sequence Assembler is revolutionary bioinformatics software for manual and automatic DNA sequence assembly , DNA sequence analysis, contig editing, file format conversion and mutation detection.
With DNA Baser Sequence Assembler you can also:
Assemble or align multiple DNA samples to a reference sequence
Batch assemble or align groups of sequences by name (it will automatically recognize sequence pairs)
Preview FASTA sequences and chromatograms as you navigate through your folders
View, analyze and edit ABI, SCF, FASTA, SEQ, TXT, GBK sequences
Mark specific chromatogram regions (like discrepancies, low-quality areas) with colors & quickly navigate to these regions
Convert or batch-convert between different file formats (ABI, SCF, SEQ, FASTA, multi-FASTA, GBK...)
Detect double peak mutations
Detect mutations between two (or more) chromatograms
Use the embedded base caller to re-call undetermined (N) bases
Reassess the base quality (QV)
Easily overview your project using the synchronized chromatogram/assembly grid/contig map
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Clone Manager is a commercial bioinformatics software work suite of Sci-Ed, that supports molecular biologists with data management and allows to perform certain in silico preanalysis.Clone Manager provides a comprehensive, fully integrated set of tools for enzyme operations, cloning simulation, graphic map drawing, primer design and analysis, global and local......
A free and open source GUI toolkit for DNA editing - written in pythonThis project aims to provide a powerful codebase for viewing, editing and creating DNA in the GenBank format. The code is free to use, modify and re-distribute under a GPL license. Contributions in the form of improvements......
ApE is a science application for plasmid editing.Highlights restriction sites in the editing windowAccurately reflects Dam/Dcm blocking of enzyme sitesHighlights text using pre-defined and custom feature librariesShows translation, Tm, %GC, ORF of selected DNA in real-timeReads DNA Strider, Fasta, Genbank and EMBL filesSaves files as DNA Strider-compatible or Genbank file......
BioEdit is a biological sequence alignment editor written for Windows 95/98/NT/2000/XP/7. An intuitive multiple document interface with convenient features makes alignment and manipulation of sequences relatively easy on your desktop computer. Several sequence manipulation and analysis options and links to external analysis programs facilitate a working environment which allows you......
Geneious combines all the major DNA and protein sequence analysis tools into one revolutionary software solution!......
4Peaks - For Peaks, Four Peaks. The award winning 4Peaks helps molecular biologists to visualize and edit their DNA sequence trace files. Analyzing your sequence has never been so much fun!......
The DNASTAR Lasergene package is the most robust of our software offerings, and includes all of the applications from our genomics, structural biology, molecular biology, and cloning suites.Whether your work focuses on next-gen sequencing assembly and analysis, clinical research, or traditional sequence analysis, the DNASTAR Lasergene package will meet your......
By playing EteRNA, you will participate in creating the first large-scale library of synthetic RNA designs. Your efforts will help reveal new principles for designing RNA-based switches and nanomachines -- new systems for seeking and eventually controlling living cells and disease-causing viruses. By interacting with thousands of players and learning......
UGENE is a free open-source cross-platform bioinformatics software......
SnapGene is the first molecular biology software that is easier to use than pen and paper. Now every DNA construct made in your lab can be documented in a rich electronic format… and thanks to the free SnapGene Viewer, the files can be shared with colleagues around the world.SnapGene offers......
Genome Compiler is an easy to use genetic design platform allowing researchers to manipulate and design everything from single genes to entire genomes.......
Two software applications are available from Technelysium: Chromas and ChromasPro.Chromas is a simple, easy-to-use viewer and editor for sequencing chromatograms. Chromas is ideal for the most basic of sequencing projects, where assembly of multiple sequences is not required. It can export edited sequences or send them to the BLAST server......
DNADynamo - for Windows, OSX and Linux. Download it now for abi/scf trace alignments, sub cloning and plasmid management, blast/sequence retrieval, sequence annotation and structure viewing - all in one integrated and easy to use bioinformatics program.......
Sorry, we have added any description on CLC bio......
Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of plugins are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.Cytoscape supports many use cases in molecular and systems biology, genomics,......
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