Top 15 DNApy Alternative and Similar Softwares | Dec 2024

A free and open source GUI toolkit for DNA editing - written in python

This project aims to provide a powerful codebase for viewing, editing and creating DNA in the GenBank format. The code is free to use, modify and re-distribute under a GPL license. Contributions in the form of improvements and new functions are welcome and encouraged!

The software is being developed on a Linux machine and works well in that environment.

1. Genome Compiler

Genome Compiler Genome Compiler is an easy to use genetic design platform allowing researchers to manipulate and design everything from single genes to entire genomes.......

2. OpenCFU

OpenCFU OpenCFU is a completely open source lightweight application designed to enumerate clustered circular objects such as bacterial colonies. It can handle digital pictures as well as live stream from a video device/webcam. OpenCFU is cross-platform, fast, reliable and allows the user to implement intuitive filters.Additional information is provided on the......

3. SnapGene

SnapGene SnapGene is the first molecular biology software that is easier to use than pen and paper. Now every DNA construct made in your lab can be documented in a rich electronic format… and thanks to the free SnapGene Viewer, the files can be shared with colleagues around the world.SnapGene offers......

4. 4peaks

4peaks 4Peaks - For Peaks, Four Peaks. The award winning 4Peaks helps molecular biologists to visualize and edit their DNA sequence trace files. Analyzing your sequence has never been so much fun!......

5. ApE - A plasmid Editor

ApE - A plasmid Editor ApE is a science application for plasmid editing.Highlights restriction sites in the editing windowAccurately reflects Dam/Dcm blocking of enzyme sitesHighlights text using pre-defined and custom feature librariesShows translation, Tm, %GC, ORF of selected DNA in real-timeReads DNA Strider, Fasta, Genbank and EMBL filesSaves files as DNA Strider-compatible or Genbank file......

6. Clone Manager

Clone Manager Clone Manager is a commercial bioinformatics software work suite of Sci-Ed, that supports molecular biologists with data management and allows to perform certain in silico preanalysis.Clone Manager provides a comprehensive, fully integrated set of tools for enzyme operations, cloning simulation, graphic map drawing, primer design and analysis, global and local......

7. Lucid

Lucid Lucid tools are powerful and highly flexible knowledge management software applications designed to help users with identification or diagnostic tasks.Lucid software is a special type of expert system, specifically designed for identification and diagnostic purposes, which enables expert knowledge to be “cloned” and distributed to a wide audience via CD......

8. PQ Calculator

PQ Calculator PQ Calculator was developed as an easy-to-use and small application that acts as a gene and genotype frequency calculator. All you have to do is input all the required variables and press the Calculate button, the software will do the rest.Based on Hardy Weinberg Law of Ecology......

9. Calc98

Calc98 Calc98 is a small but very powerful scientific calculator, with lots of features:Version 5.3 (totally free)# RPN# Base-n, hex, octal and binary modes# Scientific/Engineering Functions# Matrix/Array Functions# Complex Numbers# Statistical Functions# Financial Functions# Time functions (calculations, watch, countdown, etc)# Angles (degrees, minutes, seconds)# Roman numerals (!)# Periodic Table of Elements......

10. BioEdit

BioEdit BioEdit is a biological sequence alignment editor written for Windows 95/98/NT/2000/XP/7. An intuitive multiple document interface with convenient features makes alignment and manipulation of sequences relatively easy on your desktop computer. Several sequence manipulation and analysis options and links to external analysis programs facilitate a working environment which allows you......

11. Plasm

Plasm A plasmid drawing software. Nucleic acid sequence independent Modification of an existing file by insertion or deletion of DNA fragments Built-in library with some of the most current plasmids Export pictures into other applicationsPlasm - plasmid drawing software Plasm - plasmid drawing softwareWhy Plasm ?Plasm is useful for people who......

12. Vector NTI

Vector NTI Vector NTI is a bioinformatics software package. The current versions are v11.5.1 for Windows/PCs and v7.1 for Macs, but only supporting Mac OS X v10.3 (Panther).Features create, annotate, analyse, and share DNA/protein sequences perform and save BLAST searches design primers for PCR, cloning, sequencing or hybridisation experiments plan cloning and......

13. GENtle V2

GENtle V2 The Browser Based, Open Source, DNA Assembly App......

14. VectorFriends

VectorFriends VectorFriends combines various types of cloning simulations, sequence analysis and data management into one application. It's free for academic researchers.......

15. BioBlender

BioBlender BioBlender is a software package built on the open-source 3D modeling software Blender .Biology works at nanoscale, with objects invisible to the human eye. With BioBlender it is possible to show some of the characters that populate our cells, based on scientific data and the highest standard of 3D......